Disk I/O error while update in fedora 38beta

frankjunior · March 23, 2023, 8:37am

Fedora 38 - x86_64                               11 kB/s |  37 kB     00:03    
Fedora 38 - x86_64                               59 kB/s | 2.8 MB     00:49    
Fedora Modular 38 - x86_64                      1.5 kB/s | 3.6 kB     00:02    
Fedora Modular 38 - x86_64                       42 kB/s | 177 kB     00:04    
Fedora 38 - x86_64 - Updates                    3.0 kB/s | 4.4 kB     00:01    
Fedora Modular 38 - x86_64 - Updates            2.0 kB/s | 4.3 kB     00:02    
Fedora 38 - x86_64 - Test Updates               2.0 kB/s | 4.6 kB     00:02    
Fedora 38 - x86_64 - Test Updates               126 kB/s | 2.3 MB     00:18    
Fedora Modular 38 - x86_64 - Test Updates       1.6 kB/s | 3.7 kB     00:02    
Dependencies resolved.
================================================================================
 Package                         Arch   Version           Repository       Size
================================================================================
Upgrading:
 adwaita-cursor-theme            noarch 44.0-1.fc38       updates-testing 633 k
 adwaita-icon-theme              noarch 44.0-1.fc38       updates-testing 1.1 M
 at-spi2-atk                     x86_64 2.48.0-1.fc38     updates-testing  85 k
 at-spi2-core                    x86_64 2.48.0-1.fc38     updates-testing 372 k
 atk                             x86_64 2.48.0-1.fc38     updates-testing  81 k
 baobab                          x86_64 44.0-1.fc38       updates-testing 472 k
 btrfs-progs                     x86_64 6.2.1-2.fc38      updates-testing 993 k
 dracut                          x86_64 059-2.fc38        updates-testing 428 k
 dracut-config-rescue            x86_64 059-2.fc38        updates-testing  12 k
 dracut-live                     x86_64 059-2.fc38        updates-testing  29 k
 dracut-network                  x86_64 059-2.fc38        updates-testing  76 k
 dracut-squash                   x86_64 059-2.fc38        updates-testing  12 k
 eog                             x86_64 44.0-1.fc38       updates-testing 1.6 M
 epiphany                        x86_64 1:44.0-1.fc38     updates-testing 1.7 M
 epiphany-runtime                x86_64 1:44.0-1.fc38     updates-testing 853 k
 evince                          x86_64 44.1-1.fc38       updates-testing 2.0 M
 evince-djvu                     x86_64 44.1-1.fc38       updates-testing  30 k
 evince-libs                     x86_64 44.1-1.fc38       updates-testing 346 k
 evince-previewer                x86_64 44.1-1.fc38       updates-testing  34 k
 evince-thumbnailer              x86_64 44.1-1.fc38       updates-testing  18 k
 evolution-data-server           x86_64 3.48.0-1.fc38     updates-testing 2.4 M
 evolution-data-server-langpacks noarch 3.48.0-1.fc38     updates-testing 1.2 M
 gjs                             x86_64 1.76.0-1.fc38     updates-testing 506 k
 glib-networking                 x86_64 2.76.0-2.fc38     updates-testing 196 k
 glib2                           x86_64 2.76.1-1.fc38     updates-testing 2.8 M
 gnome-autoar                    x86_64 0.4.4-1.fc38      updates-testing  58 k
 gnome-backgrounds               noarch 44.0-1.fc38       updates-testing  24 M
 gnome-bluetooth                 x86_64 1:42.5-3.fc38     updates-testing  44 k
 gnome-bluetooth-libs            x86_64 1:42.5-3.fc38     updates-testing 287 k
 gnome-boxes                     x86_64 44.0-1.fc38       updates-testing 1.2 M
 gnome-calculator                x86_64 44.0-1.fc38       updates-testing 1.4 M
 gnome-characters                x86_64 44.0-1.fc38       updates-testing 547 k
 gnome-classic-session           noarch 44.0-1.fc38       updates-testing  34 k
 gnome-clocks                    x86_64 44.0-1.fc38       updates-testing 416 k
 gnome-connections               x86_64 44.0-1.fc38       updates-testing 241 k
 gnome-console                   x86_64 44.0-1.fc38       updates-testing 164 k
 gnome-contacts                  x86_64 44.0-1.fc38       updates-testing 507 k
 gnome-control-center            x86_64 44.0-1.fc38       updates-testing 6.7 M
 gnome-control-center-filesystem noarch 44.0-1.fc38       updates-testing  12 k
 gnome-desktop3                  x86_64 44.0-1.fc38       updates-testing 661 k
 gnome-desktop4                  x86_64 44.0-1.fc38       updates-testing 148 k
 gnome-disk-utility              x86_64 44.0-1.fc38       updates-testing 1.1 M
 gnome-font-viewer               x86_64 44.0-1.fc38       updates-testing 244 k
 gnome-initial-setup             x86_64 44.0-1.fc38       updates-testing 566 k
 gnome-maps                      x86_64 44.0-2.fc38       updates-testing 817 k
 gnome-remote-desktop            x86_64 44.0-1.fc38       updates-testing 264 k
 gnome-session                   x86_64 44.0-1.fc38       updates-testing 404 k
 gnome-session-wayland-session   x86_64 44.0-1.fc38       updates-testing  13 k
 gnome-session-xsession          x86_64 44.0-1.fc38       updates-testing  12 k
 gnome-settings-daemon           x86_64 44.0-2.fc38       updates-testing 1.1 M
 gnome-shell                     x86_64 44.0-2.fc38       updates-testing 1.7 M
 gnome-shell-extension-apps-menu noarch 44.0-1.fc38       updates-testing  16 k
 gnome-shell-extension-common    noarch 44.0-1.fc38       updates-testing 148 k
 gnome-shell-extension-launch-new-instance
                                 noarch 44.0-1.fc38       updates-testing  10 k
 gnome-shell-extension-places-menu
                                 noarch 44.0-1.fc38       updates-testing  15 k
 gnome-shell-extension-window-list
                                 noarch 44.0-1.fc38       updates-testing  24 k
 gnome-software                  x86_64 44.0-1.fc38       updates-testing 1.7 M
 gnome-system-monitor            x86_64 44.0-1.fc38       updates-testing 1.0 M
 gnome-terminal                  x86_64 3.48.0-1.fc38     updates-testing 1.5 M
 gnome-terminal-nautilus         x86_64 3.48.0-1.fc38     updates-testing  31 k
 gnome-text-editor               x86_64 44.0-1.fc38       updates-testing 539 k
 gnome-tour                      x86_64 44.0-1.fc38       updates-testing 668 k
 gnome-user-docs                 noarch 44.0-1.fc38       updates-testing  14 M
 gnome-weather                   noarch 44.0-1.fc38       updates-testing 191 k
 gobject-introspection           x86_64 1.76.0-1.fc38     updates-testing 262 k
 grub2-common                    noarch 1:2.06-89.fc38    updates-testing 921 k
 grub2-efi-ia32                  x86_64 1:2.06-89.fc38    updates-testing 2.1 M
 grub2-efi-ia32-cdboot           x86_64 1:2.06-89.fc38    updates-testing 2.1 M
 grub2-efi-x64                   x86_64 1:2.06-89.fc38    updates-testing 2.2 M
 grub2-efi-x64-cdboot            x86_64 1:2.06-89.fc38    updates-testing 2.1 M
 grub2-pc                        x86_64 1:2.06-89.fc38    updates-testing  19 k
 grub2-pc-modules                noarch 1:2.06-89.fc38    updates-testing 954 k
 grub2-tools                     x86_64 1:2.06-89.fc38    updates-testing 1.8 M
 grub2-tools-efi                 x86_64 1:2.06-89.fc38    updates-testing 559 k
 grub2-tools-extra               x86_64 1:2.06-89.fc38    updates-testing 864 k
 grub2-tools-minimal             x86_64 1:2.06-89.fc38    updates-testing 623 k
 gsettings-desktop-schemas       x86_64 44.0-1.fc38       updates-testing 733 k
 gtksourceview5                  x86_64 5.8.0-1.fc38      updates-testing 1.0 M
 gvfs                            x86_64 1.50.4-1.fc38     updates-testing 346 k
 gvfs-afc                        x86_64 1.50.4-1.fc38     updates-testing  54 k
 gvfs-afp                        x86_64 1.50.4-1.fc38     updates-testing  67 k
 gvfs-archive                    x86_64 1.50.4-1.fc38     updates-testing  23 k
 gvfs-client                     x86_64 1.50.4-1.fc38     updates-testing 744 k
 gvfs-fuse                       x86_64 1.50.4-1.fc38     updates-testing  28 k
 gvfs-goa                        x86_64 1.50.4-1.fc38     updates-testing  63 k
 gvfs-gphoto2                    x86_64 1.50.4-1.fc38     updates-testing  59 k
 gvfs-mtp                        x86_64 1.50.4-1.fc38     updates-testing  59 k
 gvfs-smb                        x86_64 1.50.4-1.fc38     updates-testing  39 k
 libadwaita                      x86_64 1.3.1-1.fc38      updates-testing 472 k
 libavcodec-free                 x86_64 6.0-2.fc38        updates-testing 4.1 M
 libavfilter-free                x86_64 6.0-2.fc38        updates-testing 1.5 M
 libavformat-free                x86_64 6.0-2.fc38        updates-testing 1.1 M
 libavutil-free                  x86_64 6.0-2.fc38        updates-testing 338 k
 libpeas                         x86_64 1.36.0-1.fc38     updates-testing 134 k
 libpeas-gtk                     x86_64 1.36.0-1.fc38     updates-testing  29 k
 libpeas-loader-python3          x86_64 1.36.0-1.fc38     updates-testing  20 k
 libplacebo                      x86_64 5.264.0-1.fc38    updates-testing 347 k
 libpostproc-free                x86_64 6.0-2.fc38        updates-testing  49 k
 libswresample-free              x86_64 6.0-2.fc38        updates-testing  69 k
 libswscale-free                 x86_64 6.0-2.fc38        updates-testing 190 k
 libtracker-sparql               x86_64 3.5.0-1.fc38      updates-testing 374 k
 libva                           x86_64 2.18.0-1.fc38     updates-testing 105 k
 mediawriter                     x86_64 5.0.6-1.fc38      updates-testing 952 k
 mtools                          x86_64 4.0.43-1.fc38     updates-testing 219 k
 mutter                          x86_64 44.0-1.fc38       updates-testing 2.4 M
 oneVPL                          x86_64 2023.1.3-2.fc38   updates-testing 132 k
 oneVPL-intel-gpu                x86_64 23.1.3-2.fc38     updates-testing 2.2 M
 passt                           x86_64 0^20230321.g1ee2f7c-1.fc38
                                                          updates-testing 177 k
 passt-selinux                   noarch 0^20230321.g1ee2f7c-1.fc38
                                                          updates-testing  28 k
 python3-gobject                 x86_64 3.44.0-1.fc38     updates-testing  17 k
 python3-gobject-base            x86_64 3.44.0-1.fc38     updates-testing 201 k
 python3-gobject-base-noarch     noarch 3.44.0-1.fc38     updates-testing 195 k
 simple-scan                     x86_64 44.0-1.fc38       updates-testing 1.3 M
 tracker                         x86_64 3.5.0-1.fc38      updates-testing 578 k
 tracker-miners                  x86_64 3.5.0-1.fc38      updates-testing 957 k
 vim-data                        noarch 2:9.0.1423-1.fc38 updates-testing  23 k
 vim-minimal                     x86_64 2:9.0.1423-1.fc38 updates-testing 795 k
 vte-profile                     x86_64 0.72.0-1.fc38     updates-testing  26 k
 vte291                          x86_64 0.72.0-1.fc38     updates-testing 321 k
 vte291-gtk4                     x86_64 0.72.0-1.fc38     updates-testing 226 k
 wpebackend-fdo                  x86_64 1.14.2-1.fc38     updates-testing  47 k

Transaction Summary
================================================================================
Upgrade  121 Packages

Total download size: 117 M
Is this ok [y/N]: y
Downloading Packages:
(1/121): atk-2.47.90-1.fc38_2.48.0-1.fc38.x86_6 9.1 kB/s |  10 kB     00:01    
(2/121): at-spi2-atk-2.47.90-1.fc38_2.48.0-1.fc  12 kB/s |  16 kB     00:01    
(3/121): at-spi2-core-2.47.90-1.fc38_2.48.0-1.f  61 kB/s |  84 kB     00:01    
(4/121): baobab-44~rc-1.fc38_44.0-1.fc38.x86_64 260 kB/s | 202 kB     00:00    
(5/121): evince-44~rc-2.fc38_44.1-1.fc38.x86_64 554 kB/s | 792 kB     00:01    
[DRPM 1/54] atk-2.47.90-1.fc38_2.48.0-1.fc38.x86_64.drpm: done                 
[DRPM 2/54] at-spi2-atk-2.47.90-1.fc38_2.48.0-1.fc38.x86_64.drpm: done         
(6/121): epiphany-44~rc-3.fc38_44.0-1.fc38.x86_  95 kB/s | 262 kB     00:02    
(7/121): evince-djvu-44~rc-2.fc38_44.1-1.fc38.x  37 kB/s |  10 kB     00:00    
(8/121): epiphany-runtime-44~rc-3.fc38_44.0-1.f  86 kB/s | 268 kB     00:03    
(9/121): evince-libs-44~rc-2.fc38_44.1-1.fc38.x  74 kB/s |  37 kB     00:00    
(10/121): evolution-data-server-3.47.3-3.fc38_3 420 kB/s | 424 kB     00:01    
(11/121): gjs-1.75.90-2.fc38_1.76.0-1.fc38.x86_  65 kB/s |  79 kB     00:01    
[DRPM 3/54] evince-djvu-44~rc-2.fc38_44.1-1.fc38.x86_64.drpm: done             
(12/121): evolution-data-server-langpacks-3.47.  42 kB/s |  87 kB     00:02    
(13/121): glib2-2.76.0-1.fc38_2.76.1-1.fc38.x86 331 kB/s | 532 kB     00:01    
(14/121): gnome-boxes-44~rc-2.fc38_44.0-1.fc38.  97 kB/s | 635 kB     00:06    
[DRPM 4/54] epiphany-runtime-44~rc-3.fc38_44.0-1.fc38.x86_64.drpm: done        
[DRPM 5/54] evince-libs-44~rc-2.fc38_44.1-1.fc38.x86_64.drpm: done             
(15/121): gnome-calculator-44~rc-1.fc38_44.0-1.  93 kB/s | 578 kB     00:06    
(16/121): gnome-characters-44~rc-1.fc38_44.0-1. 5.0 kB/s |  32 kB     00:06    
(17/121): gnome-classic-session-44~rc-1.fc38_44 9.7 kB/s | 8.9 kB     00:00    
(18/121): gnome-clocks-44~rc-1.fc38_44.0-1.fc38 136 kB/s | 198 kB     00:01    
(19/121): gnome-connections-44~rc-1.fc38_44.0-1  73 kB/s | 119 kB     00:01    
[DRPM 6/54] gjs-1.75.90-2.fc38_1.76.0-1.fc38.x86_64.drpm: done                 
(20/121): gnome-contacts-44~rc-1.fc38_44.0-1.fc 175 kB/s | 283 kB     00:01    
(21/121): gnome-disk-utility-44~rc-1.fc38_44.0- 124 kB/s | 199 kB     00:01    
[DRPM 7/54] baobab-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done                  
(22/121): gnome-font-viewer-44~rc-1.fc38_44.0-1  38 kB/s |  78 kB     00:02    
(23/121): gnome-maps-44~rc-2.fc38_44.0-2.fc38.x  74 kB/s |  69 kB     00:00    
[DRPM 8/54] at-spi2-core-2.47.90-1.fc38_2.48.0-1.fc38.x86_64.drpm: done        
(24/121): gnome-initial-setup-44~rc-2.fc38_44.0  97 kB/s | 336 kB     00:03    
(25/121): gnome-remote-desktop-44~rc-1.fc38_44.  79 kB/s | 189 kB     00:02    
(26/121): gnome-session-wayland-session-44~rc-1 6.3 kB/s | 5.9 kB     00:00    
(27/121): gnome-session-44~rc-1.fc38_44.0-1.fc3 108 kB/s | 169 kB     00:01    
(28/121): gnome-session-xsession-44~rc-1.fc38_4  12 kB/s | 5.8 kB     00:00    
(29/121): gnome-shell-44~rc-2.fc38_44.0-2.fc38. 131 kB/s | 190 kB     00:01    
(30/121): gnome-settings-daemon-44~rc-1.fc38_44 168 kB/s | 392 kB     00:02    
(31/121): gnome-shell-extension-apps-menu-44~rc 8.6 kB/s | 7.5 kB     00:00    
(32/121): gnome-shell-extension-launch-new-inst  33 kB/s | 7.1 kB     00:00    
(33/121): gnome-shell-extension-places-menu-44~  27 kB/s | 7.5 kB     00:00    
(34/121): gnome-shell-extension-common-44~rc-1.  38 kB/s |  27 kB     00:00    
(35/121): gnome-shell-extension-window-list-44~  28 kB/s | 8.5 kB     00:00    
(36/121): gnome-control-center-44~rc-1.fc38_44. 255 kB/s | 3.0 MB     00:12    
[DRPM 9/54] evolution-data-server-3.47.3-3.fc38_3.48.0-1.fc38.x86_64.drpm: done
(37/121): gnome-software-44~rc-1.fc38_44.0-1.fc 293 kB/s | 507 kB     00:01    
(38/121): gnome-system-monitor-44~rc-1.fc38_44. 162 kB/s | 320 kB     00:01    
(39/121): gnome-terminal-nautilus-3.47.92-1.fc3  12 kB/s |  10 kB     00:00    
(40/121): gnome-terminal-3.47.92-1.fc38_3.48.0- 308 kB/s | 433 kB     00:01    
(41/121): gnome-weather-44~rc-1.fc38_44.0-1.fc3 194 kB/s |  37 kB     00:00    
(42/121): gtksourceview5-5.7.2-1.fc38_5.8.0-1.f 319 kB/s | 130 kB     00:00    
(43/121): gnome-text-editor-44~rc-1.fc38_44.0-1 199 kB/s | 272 kB     00:01    
[DRPM 10/54] epiphany-44~rc-3.fc38_44.0-1.fc38.x86_64.drpm: done               
(44/121): libadwaita-1.3~rc-1.fc38_1.3.1-1.fc38 185 kB/s | 137 kB     00:00    
(45/121): libtracker-sparql-3.5.0~rc-1.fc38_3.5  81 kB/s |  44 kB     00:00    
(46/121): passt-selinux-0^20230317.gdd23496-1.f  52 kB/s |  13 kB     00:00    
(47/121): mutter-44~rc-5.fc38_44.0-1.fc38.x86_6 255 kB/s | 225 kB     00:00    
[DRPM 11/54] gnome-boxes-44~rc-2.fc38_44.0-1.fc38.x86_64.drpm: done            
(48/121): tracker-3.5.0~rc-1.fc38_3.5.0-1.fc38. 281 kB/s | 280 kB     00:00    
[DRPM 12/54] evolution-data-server-langpacks-3.47.3-3.fc38_3.48.0-1.fc38.noarch.drpm: done   
(49/121): vim-data-9.0.1407-1.fc38_9.0.1423-1.f  19 kB/s |  13 kB     00:00    
(50/121): vte-profile-0.71.99-1.fc38_0.72.0-1.f  31 kB/s |  12 kB     00:00    
[DRPM 13/54] gnome-classic-session-44~rc-1.fc38_44.0-1.fc38.noarch.drpm: done  
(51/121): gnome-user-docs-44~rc-1.fc38_44.0-1.f 920 kB/s | 3.9 MB     00:04    
[DRPM 14/54] glib2-2.76.0-1.fc38_2.76.1-1.fc38.x86_64.drpm: done               
(52/121): vte291-0.71.99-1.fc38_0.72.0-1.fc38.x  54 kB/s |  60 kB     00:01    
(53/121): vte291-gtk4-0.71.99-1.fc38_0.72.0-1.f  29 kB/s |  31 kB     00:01    
[DRPM 15/54] evince-44~rc-2.fc38_44.1-1.fc38.x86_64.drpm: done                 
(54/121): wpebackend-fdo-1.14.1-1.fc38_1.14.2-1  36 kB/s |  18 kB     00:00    
(55/121): btrfs-progs-6.2.1-2.fc38.x86_64.rpm   587 kB/s | 993 kB     00:01    
(56/121): adwaita-cursor-theme-44.0-1.fc38.noar 305 kB/s | 633 kB     00:02    
(57/121): dracut-config-rescue-059-2.fc38.x86_6  60 kB/s |  12 kB     00:00    
(58/121): dracut-059-2.fc38.x86_64.rpm          660 kB/s | 428 kB     00:00    
(59/121): dracut-live-059-2.fc38.x86_64.rpm     146 kB/s |  29 kB     00:00    
(60/121): dracut-network-059-2.fc38.x86_64.rpm  271 kB/s |  76 kB     00:00    
(61/121): dracut-squash-059-2.fc38.x86_64.rpm    36 kB/s |  12 kB     00:00    
(62/121): adwaita-icon-theme-44.0-1.fc38.noarch 374 kB/s | 1.1 MB     00:02    
(63/121): evince-previewer-44.1-1.fc38.x86_64.r 150 kB/s |  34 kB     00:00    
(64/121): evince-thumbnailer-44.1-1.fc38.x86_64  33 kB/s |  18 kB     00:00    
(65/121): glib-networking-2.76.0-2.fc38.x86_64. 268 kB/s | 196 kB     00:00    
(66/121): gnome-autoar-0.4.4-1.fc38.x86_64.rpm  155 kB/s |  58 kB     00:00    
(67/121): gnome-bluetooth-42.5-3.fc38.x86_64.rp 177 kB/s |  44 kB     00:00    
(68/121): gnome-bluetooth-libs-42.5-3.fc38.x86_ 341 kB/s | 287 kB     00:00    
(69/121): gnome-console-44.0-1.fc38.x86_64.rpm  214 kB/s | 164 kB     00:00    
(70/121): gnome-control-center-filesystem-44.0-  58 kB/s |  12 kB     00:00    
(71/121): eog-44.0-1.fc38.x86_64.rpm            476 kB/s | 1.6 MB     00:03    
(72/121): gnome-desktop4-44.0-1.fc38.x86_64.rpm 350 kB/s | 148 kB     00:00    
(73/121): gnome-desktop3-44.0-1.fc38.x86_64.rpm 405 kB/s | 661 kB     00:01    
(74/121): gnome-tour-44.0-1.fc38.x86_64.rpm     378 kB/s | 668 kB     00:01    
(75/121): gobject-introspection-1.76.0-1.fc38.x 309 kB/s | 262 kB     00:00    
(76/121): grub2-common-2.06-89.fc38.noarch.rpm  290 kB/s | 921 kB     00:03    
(77/121): grub2-efi-ia32-2.06-89.fc38.x86_64.rp 500 kB/s | 2.1 MB     00:04    
(78/121): grub2-efi-x64-2.06-89.fc38.x86_64.rpm 577 kB/s | 2.2 MB     00:03    
(79/121): grub2-efi-ia32-cdboot-2.06-89.fc38.x8 240 kB/s | 2.1 MB     00:09    
(80/121): grub2-efi-x64-cdboot-2.06-89.fc38.x86 525 kB/s | 2.1 MB     00:04    
(81/121): grub2-pc-2.06-89.fc38.x86_64.rpm       34 kB/s |  19 kB     00:00    
(82/121): grub2-pc-modules-2.06-89.fc38.noarch. 581 kB/s | 954 kB     00:01    
(83/121): grub2-tools-efi-2.06-89.fc38.x86_64.r 574 kB/s | 559 kB     00:00    
(84/121): grub2-tools-extra-2.06-89.fc38.x86_64 657 kB/s | 864 kB     00:01    
(85/121): grub2-tools-minimal-2.06-89.fc38.x86_ 657 kB/s | 623 kB     00:00    
(86/121): gsettings-desktop-schemas-44.0-1.fc38 722 kB/s | 733 kB     00:01    
(87/121): gvfs-1.50.4-1.fc38.x86_64.rpm         672 kB/s | 346 kB     00:00    
(88/121): gvfs-afc-1.50.4-1.fc38.x86_64.rpm     282 kB/s |  54 kB     00:00    
(89/121): gvfs-afp-1.50.4-1.fc38.x86_64.rpm     336 kB/s |  67 kB     00:00    
(90/121): gvfs-archive-1.50.4-1.fc38.x86_64.rpm 114 kB/s |  23 kB     00:00    
(91/121): gvfs-client-1.50.4-1.fc38.x86_64.rpm  600 kB/s | 744 kB     00:01    
(92/121): gvfs-fuse-1.50.4-1.fc38.x86_64.rpm    149 kB/s |  28 kB     00:00    
(93/121): gvfs-goa-1.50.4-1.fc38.x86_64.rpm     255 kB/s |  63 kB     00:00    
(94/121): grub2-tools-2.06-89.fc38.x86_64.rpm   224 kB/s | 1.8 MB     00:08    
(95/121): gvfs-mtp-1.50.4-1.fc38.x86_64.rpm     321 kB/s |  59 kB     00:00    
(96/121): gvfs-gphoto2-1.50.4-1.fc38.x86_64.rpm 172 kB/s |  59 kB     00:00    
(97/121): gvfs-smb-1.50.4-1.fc38.x86_64.rpm     190 kB/s |  39 kB     00:00    
(98/121): libavfilter-free-6.0-2.fc38.x86_64.rp 634 kB/s | 1.5 MB     00:02    
(99/121): libavformat-free-6.0-2.fc38.x86_64.rp 618 kB/s | 1.1 MB     00:01    
(100/121): libavutil-free-6.0-2.fc38.x86_64.rpm 238 kB/s | 338 kB     00:01    
(101/121): libpeas-1.36.0-1.fc38.x86_64.rpm     157 kB/s | 134 kB     00:00    
(102/121): libpeas-gtk-1.36.0-1.fc38.x86_64.rpm  60 kB/s |  29 kB     00:00    
(103/121): libpeas-loader-python3-1.36.0-1.fc38  69 kB/s |  20 kB     00:00    
(104/121): libplacebo-5.264.0-1.fc38.x86_64.rpm 334 kB/s | 347 kB     00:01    
(105/121): libpostproc-free-6.0-2.fc38.x86_64.r  39 kB/s |  49 kB     00:01    
(106/121): libavcodec-free-6.0-2.fc38.x86_64.rp 424 kB/s | 4.1 MB     00:09    
(107/121): libswresample-free-6.0-2.fc38.x86_64 132 kB/s |  69 kB     00:00    
(108/121): libva-2.18.0-1.fc38.x86_64.rpm       170 kB/s | 105 kB     00:00    
(109/121): libswscale-free-6.0-2.fc38.x86_64.rp 178 kB/s | 190 kB     00:01    
(110/121): mtools-4.0.43-1.fc38.x86_64.rpm      424 kB/s | 219 kB     00:00    
(111/121): oneVPL-2023.1.3-2.fc38.x86_64.rpm    339 kB/s | 132 kB     00:00    
(112/121): mediawriter-5.0.6-1.fc38.x86_64.rpm  446 kB/s | 952 kB     00:02    
(113/121): passt-0^20230321.g1ee2f7c-1.fc38.x86 368 kB/s | 177 kB     00:00    
(114/121): python3-gobject-3.44.0-1.fc38.x86_64  95 kB/s |  17 kB     00:00    
(115/121): gnome-backgrounds-44.0-1.fc38.noarch 622 kB/s |  24 MB     00:39    
(116/121): python3-gobject-base-3.44.0-1.fc38.x 411 kB/s | 201 kB     00:00    
(117/121): python3-gobject-base-noarch-3.44.0-1 604 kB/s | 195 kB     00:00    
(118/121): tracker-miners-3.5.0-1.fc38.x86_64.r 1.0 MB/s | 957 kB     00:00    
(119/121): oneVPL-intel-gpu-23.1.3-2.fc38.x86_6 644 kB/s | 2.2 MB     00:03    
(120/121): vim-minimal-9.0.1423-1.fc38.x86_64.r 893 kB/s | 795 kB     00:00    
(121/121): simple-scan-44.0-1.fc38.x86_64.rpm   491 kB/s | 1.3 MB     00:02    
[DRPM 16/54] gnome-calculator-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done       
[DRPM 17/54] gnome-characters-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done       
[DRPM 18/54] gnome-clocks-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done           
[DRPM 19/54] gnome-connections-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done      
[DRPM 20/54] gnome-contacts-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done         
[DRPM 21/54] gnome-disk-utility-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done     
[DRPM 22/54] gnome-font-viewer-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done      
[DRPM 23/54] gnome-remote-desktop-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done   
[DRPM 24/54] gnome-session-xsession-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done 
[DRPM 25/54] gnome-session-wayland-session-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done
[DRPM 26/54] gnome-shell-extension-apps-menu-44~rc-1.fc38_44.0-1.fc38.noarch.drpm: done
[DRPM 27/54] gnome-maps-44~rc-2.fc38_44.0-2.fc38.x86_64.drpm: done             
[DRPM 28/54] gnome-shell-extension-launch-new-instance-44~rc-1.fc38_44.0-1.fc38.noarch.drpm: done          
[DRPM 29/54] gnome-shell-extension-places-menu-44~rc-1.fc38_44.0-1.fc38.noarch.drpm: done  
[DRPM 30/54] gnome-initial-setup-44~rc-2.fc38_44.0-1.fc38.x86_64.drpm: done    
[DRPM 31/54] gnome-shell-extension-window-list-44~rc-1.fc38_44.0-1.fc38.noarch.drpm: done  
[DRPM 32/54] gnome-session-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done          
[DRPM 33/54] gnome-shell-extension-common-44~rc-1.fc38_44.0-1.fc38.noarch.drpm: done
[DRPM 34/54] gnome-terminal-nautilus-3.47.92-1.fc38_3.48.0-1.fc38.x86_64.drpm: done
[DRPM 35/54] gnome-settings-daemon-44~rc-1.fc38_44.0-2.fc38.x86_64.drpm: done  
[DRPM 36/54] gnome-weather-44~rc-1.fc38_44.0-1.fc38.noarch.drpm: done          
[DRPM 37/54] gnome-system-monitor-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done   
[DRPM 38/54] gnome-software-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done         
[DRPM 39/54] gnome-shell-44~rc-2.fc38_44.0-2.fc38.x86_64.drpm: done            
[DRPM 40/54] gnome-text-editor-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done      
[DRPM 41/54] libadwaita-1.3~rc-1.fc38_1.3.1-1.fc38.x86_64.drpm: done           
[DRPM 42/54] passt-selinux-0^20230317.gdd23496-1.fc38_0^20230321.g1ee2f7c-1.fc38.noarch.drpm: done           
[DRPM 43/54] libtracker-sparql-3.5.0~rc-1.fc38_3.5.0-1.fc38.x86_64.drpm: done  
[DRPM 44/54] vim-data-9.0.1407-1.fc38_9.0.1423-1.fc38.noarch.drpm: done        
[DRPM 45/54] vte-profile-0.71.99-1.fc38_0.72.0-1.fc38.x86_64.drpm: done        
[DRPM 46/54] tracker-3.5.0~rc-1.fc38_3.5.0-1.fc38.x86_64.drpm: done            
[DRPM 47/54] gnome-terminal-3.47.92-1.fc38_3.48.0-1.fc38.x86_64.drpm: done     
[DRPM 48/54] gtksourceview5-5.7.2-1.fc38_5.8.0-1.fc38.x86_64.drpm: done        
[DRPM 49/54] vte291-gtk4-0.71.99-1.fc38_0.72.0-1.fc38.x86_64.drpm: done        
[DRPM 50/54] wpebackend-fdo-1.14.1-1.fc38_1.14.2-1.fc38.x86_64.drpm: done      
[DRPM 51/54] vte291-0.71.99-1.fc38_0.72.0-1.fc38.x86_64.drpm: done             
[DRPM 52/54] gnome-control-center-44~rc-1.fc38_44.0-1.fc38.x86_64.drpm: done   
[DRPM 53/54] mutter-44~rc-5.fc38_44.0-1.fc38.x86_64.drpm: done                 
[DRPM 54/54] gnome-user-docs-44~rc-1.fc38_44.0-1.fc38.noarch.drpm: done        
--------------------------------------------------------------------------------
Total                                           505 kB/s |  78 MB     02:38     
Delta RPMs reduced 117.2 MB of updates to 78.4 MB (33.1% saved)
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Preparing        :                                                        1/1 
Transaction couldn't start:
package tracker-3.5.0-1.fc38.x86_64 does not verify: hdr blob(23529): BAD, read returned -1
package libavcodec-free-6.0-2.fc38.x86_64 does not verify: read failed: Input/output error (5)

The downloaded packages were saved in cache until the next successful transaction.
You can remove cached packages by executing 'dnf clean packages'.
Error: Could not run transaction.

now

sudo dnf clean packages
Config error: [Errno 30] Read-only file system: '/var/log/dnf.log': '/var/log/dnf.log'

And now i don’t have mouse pointer

Can’t open apps like firefox or something and after some reboot and tried to boot other recovery kernels issue was same and now i can’t boot system crashed strange.

I find some btrfs error here.

mattdm · March 23, 2023, 10:19am

It sounds like a glitch happened — probably a hardware problem (either a transient problem from a power surge or a cosmic ray, but it’s always possible that there was some software bug.

I think it’s unlikely that this was related directly to the update, but rather that an update like this causes a large amount of memory, CPU, and disk usage — which is when problems appear.

When there is a glitch like this, filesystems like ext4 or xfs may not even notice, resulting in silent corruption. For better or worse, btrfs tends to react in a very conservative way, entirely refusing to mount the filesystem.

We have some other topics around here about recovery in similar situations…

mattdm · March 23, 2023, 10:32am

Possibly

marko23 · March 23, 2023, 10:46am

The error message on your first screen is perfectly clear, two packages fail simple authentication test that can happen with beta release or anything really. Simply remove the two packages with dependencies and reinstall after update, or just wait.

I have issues with 38 beta on a Microsoft Surface Go with the mouse disappearing … just reboot (something related to closed source hardware and specific implementation of EFI a bit like Apple).

frankjunior · March 23, 2023, 11:16am

System is now in unbootable state i am thinking if switching to a different filesystem reduce this failure?

frankjunior · March 23, 2023, 11:21am

Yes cosmic rays sometime flips bits here and there but btrfs is registrant to this as far as i know small chnages can be silently fixed but i don’t think it really…
I will include a journalctl for better indepth view if something software hardware what actually happend.

mattdm · March 23, 2023, 1:01pm

I don’t think btrfs is actually (at this point) more unstable than other choices — just more likely to show problems in this dramatic way.

frankjunior · March 23, 2023, 4:33pm

https://paste.centos.org/view/43ab6aba
what kind of error it is???

$sudo dnf update
error: sqlite failure: CREATE TABLE IF NOT EXISTS 'Packages' (hnum INTEGER PRIMARY KEY AUTOINCREMENT,blob BLOB NOT NULL): disk I/O error
error: cannot open Packages index using sqlite - No such file or directory (2)
error: cannot open Packages database in /usr/lib/sysimage/rpm
Error: Error: rpmdb open failed

mattdm · March 23, 2023, 4:36pm

It says:

frankjunior · March 23, 2023, 5:13pm

Is this mean my drive failing…
I thing this is the reason why btrfs error happend before.

computersavvy · March 23, 2023, 5:47pm

Maybe.
You can usually check the health of a device with smartctl -a /dev/<device>
This may require installation of smartmontools and smartmontools-selinux, but gives a lot of information for devices that are supported (most are).

vgaetera · March 23, 2023, 6:04pm

This can also be a filesystem failure caused by a software related error.
If the hardware is working properly, solving the problem generally requires the following steps:

Boot a live session.
Make sure the filesystem is not mounted.
Perform filesystem check fixing possible errors.
Set up a chroot.
Rebuild the RPM database.
Verify all installed RPM packages and reinstall the corrupted ones.

frankjunior · March 23, 2023, 7:22pm

Sure i will do it tomorrow

I juat installed again and i will try to do it.
But i think there is a hardware issue for sure. I am thinking to switch to rhel if any issues happens after that as i have rhel dev or centos steam lets see.

vwbusguy · March 23, 2023, 10:41pm

It could mean that. It can also be a loose/failing cable. I would definitely take up @computersavvy’s suggestion in checking SMART and if it shows any issues, migrate drives. In any case, it’s always a good idea to back up your data, but most especially before upgrading your OS or whenever you see a hint of disk hardware issues.

frankjunior · March 24, 2023, 5:35pm

$ lsblk
NAME   MAJ:MIN RM   SIZE RO TYPE MOUNTPOINTS
sda      8:0    0 931.5G  0 disk 
├─sda1   8:1    0   135G  0 part 
├─sda2   8:2    0 313.7G  0 part 
├─sda3   8:3    0     1K  0 part 
├─sda4   8:4    0 390.1G  0 part 
├─sda5   8:5    0     1G  0 part /boot
└─sda6   8:6    0  91.7G  0 part /home
                                 /
sr0     11:0    1  1024M  0 rom  
zram0  252:0    0   3.3G  0 disk [SWAP]
$ smartctl -a /dev/sda6
bash: smartctl: command not found...
Failed to search for file: PackageKit daemon disappeared

$ sudo dnf update
[sudo] password: 
Last metadata expiration check: 0:09:34 ago on Friday 24 March 2023 10:55:59 PM.
History database is not writable: SQLite error on "/var/lib/dnf/history.sqlite": Executing an SQL statement failed: disk I/O error
History database is not writable: SQLite error on "/var/lib/dnf/history.sqlite": Executing an SQL statement failed: disk I/O error
Error: SQLite error on "/var/lib/dnf/history.sqlite": Executing an SQL statement failed: disk I/O error

$ sudo dnf install smartmontools
Last metadata expiration check: 0:10:54 ago on Friday 24 March 2023 10:55:59 PM.
History database is not writable: SQLite error on "/var/lib/dnf/history.sqlite": Executing an SQL statement failed: disk I/O error
History database is not writable: SQLite error on "/var/lib/dnf/history.sqlite": Executing an SQL statement failed: disk I/O error
Error: SQLite error on "/var/lib/dnf/history.sqlite": Executing an SQL statement failed: disk I/O error

vwbusguy · March 24, 2023, 5:43pm

It’s not uncommon for the kernel to put the disk in read-only mode after consecutive IO errors to prevent further damage to the drive while affording you a hope at getting one last backup in before it goes fully offline. I suggest you backup what you can immediately and replace that drive.

gnwiii · March 24, 2023, 5:57pm

After making a backup of the drive, you can boot from a “live” USB and install smartmontools there
to check drive health. Some vendors also have tests, some require Windows, others provide ISO images that boot FreeDOS (using legacy BIOS?).

You should consider whether age and/or environment warmer and wetter than S. California might be affecting cables and contacts. Auto parts stores now carry “connection enhancer” fluid due to the number of computers and associated data cables in modern cars.

frankjunior · March 24, 2023, 6:09pm

that does not work but thanks

frankjunior · March 24, 2023, 6:30pm

can you lookinto the output i cant understand if anything wrong here as i was moving large files like isos and movies which are 10-20gigs and i find no error ad file copied successfully and it is playable i have done that many times from 1 partition to another and reverse i have 4 partition and i have done this almost upto 100gigs still no issues and even i have install many apps using store with flatpaks and this apps installed with flatpak opens without a issue.

=== START OF READ SMART DATA SECTION ===
SMART overall-health self-assessment test result: PASSED

General SMART Values:
Offline data collection status:  (0x00)	Offline data collection activity
					was never started.
					Auto Offline Data Collection: Disabled.
Self-test execution status:      (   0)	The previous self-test routine completed
					without error or no self-test has ever 
					been run.
Total time to complete Offline 
data collection: 		(   80) seconds.
Offline data collection
capabilities: 			 (0x73) SMART execute Offline immediate.
					Auto Offline data collection on/off support.
					Suspend Offline collection upon new
					command.
					No Offline surface scan supported.
					Self-test supported.
					Conveyance Self-test supported.
					Selective Self-test supported.
SMART capabilities:            (0x0003)	Saves SMART data before entering
					power-saving mode.
					Supports SMART auto save timer.
Error logging capability:        (0x01)	Error logging supported.
					General Purpose Logging supported.
Short self-test routine 
recommended polling time: 	 (   1) minutes.
Extended self-test routine
recommended polling time: 	 ( 104) minutes.
Conveyance self-test routine
recommended polling time: 	 (   2) minutes.
SCT capabilities: 	       (0x1085)	SCT Status supported.

SMART Attributes Data Structure revision number: 10
Vendor Specific SMART Attributes with Thresholds:
ID# ATTRIBUTE_NAME          FLAG     VALUE WORST THRESH TYPE      UPDATED  WHEN_FAILED RAW_VALUE
  1 Raw_Read_Error_Rate     0x000f   118   099   006    Pre-fail  Always       -       189809528
  3 Spin_Up_Time            0x0003   099   097   000    Pre-fail  Always       -       0
  4 Start_Stop_Count        0x0032   098   098   020    Old_age   Always       -       2545
  5 Reallocated_Sector_Ct   0x0033   100   100   010    Pre-fail  Always       -       0
  7 Seek_Error_Rate         0x000f   079   060   030    Pre-fail  Always       -       13176266431
  9 Power_On_Hours          0x0032   097   097   000    Old_age   Always       -       3173
 10 Spin_Retry_Count        0x0013   100   100   097    Pre-fail  Always       -       0
 12 Power_Cycle_Count       0x0032   098   098   020    Old_age   Always       -       2452
183 Runtime_Bad_Block       0x0032   100   100   000    Old_age   Always       -       0
184 End-to-End_Error        0x0032   100   100   099    Old_age   Always       -       0
187 Reported_Uncorrect      0x0032   100   100   000    Old_age   Always       -       0
188 Command_Timeout         0x0032   100   098   000    Old_age   Always       -       1 1 55
189 High_Fly_Writes         0x003a   099   099   000    Old_age   Always       -       1
190 Airflow_Temperature_Cel 0x0022   060   051   045    Old_age   Always       -       40 (Min/Max 40/40)
191 G-Sense_Error_Rate      0x0032   100   100   000    Old_age   Always       -       0
192 Power-Off_Retract_Count 0x0032   100   100   000    Old_age   Always       -       207
193 Load_Cycle_Count        0x0032   097   097   000    Old_age   Always       -       7645
194 Temperature_Celsius     0x0022   040   049   000    Old_age   Always       -       40 (0 18 0 0 0)
197 Current_Pending_Sector  0x0012   100   100   000    Old_age   Always       -       0
198 Offline_Uncorrectable   0x0010   100   100   000    Old_age   Offline      -       0
199 UDMA_CRC_Error_Count    0x003e   200   200   000    Old_age   Always       -       0
240 Head_Flying_Hours       0x0000   100   253   000    Old_age   Offline      -       3222h+48m+11.526s
241 Total_LBAs_Written      0x0000   100   253   000    Old_age   Offline      -       38815107941
242 Total_LBAs_Read         0x0000   100   253   000    Old_age   Offline      -       2227873443104

SMART Error Log Version: 1
No Errors Logged

SMART Self-test log structure revision number 1
Num  Test_Description    Status                  Remaining  LifeTime(hours)  LBA_of_first_error
# 1  Short offline       Completed without error       00%      3170         -
# 2  Extended offline    Aborted by host               90%      3170         -
# 3  Short offline       Completed without error       00%      2896         -
# 4  Short offline       Completed without error       00%      2841         -
# 5  Short offline       Completed without error       00%      2837         -
# 6  Short offline       Completed without error       00%      2836         -
# 7  Short offline       Completed without error       00%      2834         -
# 8  Short offline       Completed without error       00%      2832         -
# 9  Short offline       Completed without error       00%      2831         -
#10  Short offline       Completed without error       00%      2826         -
#11  Short offline       Completed without error       00%      2825         -
#12  Short offline       Completed without error       00%      2189         -
#13  Short offline       Completed without error       00%      2139         -
#14  Short offline       Completed without error       00%      2051         -
#15  Short offline       Completed without error       00%      2050         -
#16  Short offline       Completed without error       00%      2048         -
#17  Short offline       Completed without error       00%      2045         -
#18  Extended offline    Interrupted (host reset)      00%      2044         -
#19  Short offline       Completed without error       00%      2040         -

SMART Selective self-test log data structure revision number 1
 SPAN  MIN_LBA  MAX_LBA  CURRENT_TEST_STATUS
    1        0        0  Not_testing
    2        0        0  Not_testing
    3        0        0  Not_testing
    4        0        0  Not_testing
    5        0        0  Not_testing

i am thinking if there is something else.

mattdm · March 24, 2023, 6:43pm

From the man page from smartctl:

The Attribute table printed out by smartctl also shows the “TYPE” of the Attribute. Attributes are one of two possible types: Pre-failure or Old age. Pre-failure Attributes are ones which, if less than or equal to their threshold values, indicate pending disk failure. Old age, or usage Attributes, are ones which indicate end-of-product life from old-age or normal aging and wearout, if the Attribute value is less than or equal to the threshold. Please note: the fact that an Attribute is of type ‘Pre-fail’ does not mean that your disk is about to fail! It only has this meaning if the Attribute’s current Normalized value is less than or equal to the threshold value.

If the Attribute’s current Normalized value is less than or equal to the threshold value, then the “WHEN_FAILED” column will display “FAILING_NOW”. If not, but the worst recorded value is less than or equal to the threshold value, then this column will display “In_the_past”. If the “WHEN_FAILED” column has no entry (indicated by a dash: ‘-’) then this Attribute is OK now (not failing) and has also never failed in the past.

None of the output here is under the thresholds, so this at least suggests that there are no hardware failures that the drive itself has detected. I agree with others that it might still be something like a bad cable or loose connection, but at this point I’d suggest either a software bug or a temporary glitch. Since you’ve reinstalled, I think at this point all we can do is wait to see if it happens again. (Like this.)