After running a system update any time I try to update flatpaks it only returns this
$ flatpak update
Looking for updates…
Bus error (core dumped) flatpak update
Discover also crashes almost immediately as a result as well.
This is the output the Crashed Processes Viewer gave me, though I’m admittedly not at all well versed enough to identify the issue here
PID: 25267 (flatpak)
UID: 1000
GID: 1000
Signal: 7 (BUS)
Timestamp: Tue 2026-06-16 21:54:29 -04 (1min 18s ago)
Command Line: flatpak update
Executable: /usr/bin/flatpak
Control Group: /user.slice/user-1000.slice/user@1000.service/app.slice/app-org.kde.konsole-14991.scope/tab(22578).scope
Unit: user@1000.service
User Unit: app-org.kde.konsole-14991.scope
Slice: user-1000.slice
Owner UID: 1000
Boot ID: fbb7a790ec0041a3be347ecab694b4a1
Machine ID: 5347e6cd27814ac9bd1073b195fafec7
Hostname: fedora
Storage: /var/lib/systemd/coredump/core.flatpak.1000.fbb7a790ec0041a3be347ecab694b4a1.25267.1781661269000000.zst (present)
Size on Disk: 912.8K
Package: flatpak/1.18.0-1.fc44
build-id: be5240e76642f27033b3cec7ab002211b4e41c39
Message: Process 25267 (flatpak) of user 1000 dumped core.
Module libnss_resolve.so.2 from rpm systemd-259.6-1.fc44.x86_64
Module libnss_mdns4_minimal.so.2 from rpm nss-mdns-0.15.1-28.fc44.x86_64
Module libnss_myhostname.so.2 from rpm systemd-259.6-1.fc44.x86_64
Module libudev.so.1 from rpm systemd-259.6-1.fc44.x86_64
Module libcbor.so.0.13 from rpm libcbor-0.13.0-2.fc44.x86_64
Module libcrypt.so.2 from rpm libxcrypt-4.5.2-3.fc44.x86_64
Module libkeyutils.so.1 from rpm keyutils-1.6.3-7.fc44.x86_64
Module libkrb5support.so.0 from rpm krb5-1.22.2-4.fc44.x86_64
Module libcom_err.so.2 from rpm e2fsprogs-1.47.3-4.fc44.x86_64
Module libk5crypto.so.3 from rpm krb5-1.22.2-4.fc44.x86_64
Module libkrb5.so.3 from rpm krb5-1.22.2-4.fc44.x86_64
Module libfido2.so.1 from rpm libfido2-1.16.0-5.fc44.x86_64
Module libsasl2.so.3 from rpm cyrus-sasl-2.1.28-35.fc44.x86_64
Module libevent-2.1.so.7 from rpm libevent-2.1.12-17.fc44.x86_64
Module libunistring.so.5 from rpm libunistring-1.1-11.fc44.x86_64
Module libattr.so.1 from rpm attr-2.5.2-8.fc44.x86_64
Module libblkid.so.1 from rpm util-linux-2.41.4-8.fc44.x86_64
Module libaccountsservice.so.0 from rpm accountsservice-23.13.9-16.fc44.x86_64
Module libbrotlicommon.so.1 from rpm brotli-1.2.0-3.fc44.x86_64
Module libbrotlidec.so.1 from rpm brotli-1.2.0-3.fc44.x86_64
Module libgssapi_krb5.so.2 from rpm krb5-1.22.2-4.fc44.x86_64
Module libssl.so.3 from rpm openssl-3.5.7-1.fc44.x86_64
Module libpsl.so.5 from rpm libpsl-0.21.5-7.fc44.x86_64
Module libssh.so.4 from rpm libssh-0.12.0-1.fc44.x86_64
Module libidn2.so.0 from rpm libidn2-2.3.8-3.fc44.x86_64
Module libnghttp2.so.14 from rpm nghttp2-1.68.0-4.fc44.x86_64
Module libngtcp2.so.16 from rpm ngtcp2-1.22.1-1.fc44.x86_64
Module libngtcp2_crypto_ossl.so.0 from rpm ngtcp2-1.22.1-1.fc44.x86_64
Module libnghttp3.so.9 from rpm nghttp3-1.16.0-1.fc44.x86_64
Module libbz2.so.1 from rpm bzip2-1.0.8-23.fc44.x86_64
Module liblz4.so.1 from rpm lz4-1.10.0-4.fc44.x86_64
Module libacl.so.1 from rpm acl-2.3.2-6.fc44.x86_64
Module libcomposefs.so.1 from rpm composefs-1.0.8-5.fc44.x86_64
Module libcrypto.so.3 from rpm openssl-3.5.7-1.fc44.x86_64
Module liblzma.so.5 from rpm xz-5.8.2-2.fc44.x86_64
Module libgpg-error.so.0 from rpm libgpg-error-1.58-2.fc44.x86_64
Module libstemmer.so.0 from rpm snowball-3.0.1-11.fc44.x86_64
Module libfyaml.so.0 from rpm libfyaml-0.8-9.fc44.x86_64
Module libxmlb.so.2 from rpm libxmlb-0.3.26-1.fc44.x86_64
Module libffi.so.8 from rpm libffi-3.5.2-2.fc44.x86_64
Module libselinux.so.1 from rpm libselinux-3.10-1.fc44.x86_64
Module libmount.so.1 from rpm util-linux-2.41.4-8.fc44.x86_64
Module libz.so.1 from rpm zlib-ng-2.3.3-3.fc44.x86_64
Module libgmodule-2.0.so.0 from rpm glib2-2.88.1-1.fc44.x86_64
Module libpcre2-8.so.0 from rpm pcre2-10.47-1.fc44.1.x86_64
Module libwayland-client.so.0 from rpm wayland-1.24.0-3.fc44.x86_64
Module libXau.so.6 from rpm libXau-1.0.12-4.fc44.x86_64
Module libmalcontent-0.so.0 from rpm malcontent-0.14.0-1.fc44.x86_64
Module libzstd.so.1 from rpm zstd-1.5.7-5.fc44.x86_64
Module libxml2.so.2 from rpm libxml2-2.12.10-6.fc44.x86_64
Module libseccomp.so.2 from rpm libseccomp-2.6.0-3.fc44.x86_64
Module libcurl.so.4 from rpm curl-8.18.0-6.fc44.x86_64
Module libarchive.so.13 from rpm libarchive-3.8.7-1.fc44.x86_64
Module libdconf.so.1 from rpm dconf-0.49.0-5.fc44.x86_64
Module libpolkit-gobject-1.so.0 from rpm polkit-127-2.fc44.2.x86_64
Module libpolkit-agent-1.so.0 from rpm polkit-127-2.fc44.2.x86_64
Module libsystemd.so.0 from rpm systemd-259.6-1.fc44.x86_64
Module libostree-1.so.1 from rpm ostree-2026.1-1.fc44.x86_64
Module libjson-glib-1.0.so.0 from rpm json-glib-1.10.8-5.fc44.x86_64
Module libappstream.so.5 from rpm appstream-1.1.0-3.fc44.x86_64
Module libgobject-2.0.so.0 from rpm glib2-2.88.1-1.fc44.x86_64
Module libgio-2.0.so.0 from rpm glib2-2.88.1-1.fc44.x86_64
Module libglib-2.0.so.0 from rpm glib2-2.88.1-1.fc44.x86_64
Module flatpak from rpm flatpak-1.18.0-1.fc44.x86_64
Stack trace of thread 25267:
#0 0x00007fe7458d888d sha256_transform (libglib-2.0.so.0 + 0x1588d)
#1 0x00007fe7458dbe3f sha256_sum_update.part.0 (libglib-2.0.so.0 + 0x18e3f)
#2 0x00007fe7458e02af g_compute_checksum_for_data (libglib-2.0.so.0 + 0x1d2af)
#3 0x00005620f91cf09f flatpak_dir_remote_load_cached_summary.isra.0 (flatpak + 0xba09f)
#4 0x00005620f91a936d flatpak_remote_state_ensure_subsummary (flatpak + 0x9436d)
#5 0x00005620f91d3338 _flatpak_dir_get_remote_state.constprop.0 (flatpak + 0xbe338)
#6 0x00005620f921a770 flatpak_transaction_ensure_remote_state (flatpak + 0x105770)
#7 0x00005620f921b7f9 flatpak_transaction_add_ref.lto_priv.0 (flatpak + 0x1067f9)
#8 0x00005620f921c715 flatpak_transaction_add_update (flatpak + 0x107715)
#9 0x00005620f9186624 flatpak_builtin_update (flatpak + 0x71624)
#10 0x00005620f914155b main (flatpak + 0x2c55b)
#11 0x00007fe744be1681 __libc_start_call_main (libc.so.6 + 0x3681)
#12 0x00007fe744be1798 __libc_start_main@@GLIBC_2.34 (libc.so.6 + 0x3798)
#13 0x00005620f9142a55 _start (flatpak + 0x2da55)
Stack trace of thread 25269:
#0 0x00007fe744c59412 __syscall_cancel_arch (libc.so.6 + 0x7b412)
#1 0x00007fe744c4d62c __internal_syscall_cancel (libc.so.6 + 0x6f62c)
#2 0x00007fe744c4d674 __syscall_cancel (libc.so.6 + 0x6f674)
#3 0x00007fe744cc74a6 ppoll (libc.so.6 + 0xe94a6)
#4 0x00007fe74590b125 g_main_context_iterate_unlocked.isra.0 (libglib-2.0.so.0 + 0x48125)
#5 0x00007fe74590b1e3 g_main_context_iteration (libglib-2.0.so.0 + 0x481e3)
#6 0x00007fe74590b231 glib_worker_main (libglib-2.0.so.0 + 0x48231)
#7 0x00007fe745940d12 g_thread_proxy (libglib-2.0.so.0 + 0x7dd12)
#8 0x00007fe744c50d19 start_thread (libc.so.6 + 0x72d19)
#9 0x00007fe744cd464c __clone3 (libc.so.6 + 0xf664c)
Stack trace of thread 25270:
#0 0x00007fe744c59412 __syscall_cancel_arch (libc.so.6 + 0x7b412)
#1 0x00007fe744c4d62c __internal_syscall_cancel (libc.so.6 + 0x6f62c)
#2 0x00007fe744c4d674 __syscall_cancel (libc.so.6 + 0x6f674)
#3 0x00007fe744cc74a6 ppoll (libc.so.6 + 0xe94a6)
#4 0x00007fe74590b125 g_main_context_iterate_unlocked.isra.0 (libglib-2.0.so.0 + 0x48125)
#5 0x00007fe74590b2e7 g_main_loop_run (libglib-2.0.so.0 + 0x482e7)
#6 0x00007fe7457cc6c2 gdbus_shared_thread_func.lto_priv.0 (libgio-2.0.so.0 + 0xf76c2)
#7 0x00007fe745940d12 g_thread_proxy (libglib-2.0.so.0 + 0x7dd12)
#8 0x00007fe744c50d19 start_thread (libc.so.6 + 0x72d19)
#9 0x00007fe744cd464c __clone3 (libc.so.6 + 0xf664c)
Stack trace of thread 25268:
#0 0x00007fe744cd23fd syscall (libc.so.6 + 0xf43fd)
#1 0x00007fe74593b4eb g_cond_wait (libglib-2.0.so.0 + 0x784eb)
#2 0x00007fe7458cd58c g_async_queue_pop_intern_unlocked (libglib-2.0.so.0 + 0xa58c)
#3 0x00007fe745941d64 g_thread_pool_spawn_thread (libglib-2.0.so.0 + 0x7ed64)
#4 0x00007fe745940d12 g_thread_proxy (libglib-2.0.so.0 + 0x7dd12)
#5 0x00007fe744c50d19 start_thread (libc.so.6 + 0x72d19)
#6 0x00007fe744cd464c __clone3 (libc.so.6 + 0xf664c)
Stack trace of thread 25271:
#0 0x00007fe744c59412 __syscall_cancel_arch (libc.so.6 + 0x7b412)
#1 0x00007fe744c4d62c __internal_syscall_cancel (libc.so.6 + 0x6f62c)
#2 0x00007fe744c4d674 __syscall_cancel (libc.so.6 + 0x6f674)
#3 0x00007fe744cc74a6 ppoll (libc.so.6 + 0xe94a6)
#4 0x00007fe74590b125 g_main_context_iterate_unlocked.isra.0 (libglib-2.0.so.0 + 0x48125)
#5 0x00007fe74590b2e7 g_main_loop_run (libglib-2.0.so.0 + 0x482e7)
#6 0x00007fe745334eef server_thread_func (libpolkit-agent-1.so.0 + 0x1eef)
#7 0x00007fe745940d12 g_thread_proxy (libglib-2.0.so.0 + 0x7dd12)
#8 0x00007fe744c50d19 start_thread (libc.so.6 + 0x72d19)
#9 0x00007fe744cd464c __clone3 (libc.so.6 + 0xf664c)
ELF object binary architecture: AMD x86-64
Anybody might know what’s causing this? It’s the second time something like this has occurred but on the first occasion I simply decided to just reinstall the OS, I’d like to avoid doing that this time if possible.