Certain apps not showing correctly after last update

I ran into this problem as well with version 25.0.7-2.fc41.
I have downgraded to 24.2.4-1.fc41 to resolve this.
I don’t know why it downgraded to this version, I used dnf downgrade mesa* --refresh.

These are the versions currently available to me:

$ sudo dnf search --showduplicates mesa-filesystem
Updating and loading repositories:
Repositories loaded.
Matched fields: name (exact)
 mesa-filesystem-0:24.2.4-1.fc41.i686: Mesa driver filesystem
 mesa-filesystem-0:24.2.4-1.fc41.x86_64: Mesa driver filesystem
 mesa-filesystem-0:25.0.7-2.fc41.i686: Mesa driver filesystem
 mesa-filesystem-0:25.0.7-2.fc41.x86_64: Mesa driver filesystem

My GPU is an integrated Intel:

$ /sbin/lspci | grep -e VGA
00:02.0 VGA compatible controller: Intel Corporation IvyBridge GT2 [HD Graphics 4000] (rev 09)
$ inxi -CGzxx
CPU:
  Info: quad core model: Intel Core i7-3770K bits: 64 type: MT MCP
    arch: Ivy Bridge rev: 9 cache: L1: 256 KiB L2: 1024 KiB L3: 8 MiB
  Speed (MHz): avg: 1602 min/max: 1600/3900 cores: 1: 1602 2: 1602 3: 1602
    4: 1602 5: 1602 6: 1602 7: 1602 8: 1602 bogomips: 56059
  Flags: avx ht lm nx pae sse sse2 sse3 sse4_1 sse4_2 ssse3 vmx
Graphics:
  Device-1: Intel IvyBridge GT2 [HD Graphics 4000] vendor: Gigabyte
    driver: i915 v: kernel arch: Gen-7 ports: active: DP-2 empty: DP-1, DP-3,
    HDMI-A-1, HDMI-A-2, HDMI-A-3, VGA-1 bus-ID: 00:02.0 chip-ID: 8086:0162
  Display: wayland server: X.org v: 1.21.1.16 with: Xwayland v: 24.1.6
    compositor: gnome-shell v: 47.6 driver: gpu: i915 display-ID: 0
  Monitor-1: DP-2 model: Dell U2720Q res: 3840x2160 dpi: 163
    diag: 685mm (27")
  API: OpenGL v: 4.2 vendor: intel mesa v: 24.2.4 glx-v: 1.4 es-v: 3.0
    direct-render: yes renderer: Mesa Intel HD Graphics 4000 (IVB GT2)
    device-ID: 8086:0162 display-ID: :0.0
  API: Vulkan v: 1.4.309 surfaces: xcb,xlib,wayland device: 0
    type: integrated-gpu driver: mesa intel device-ID: 8086:0162 device: 1
    type: cpu driver: mesa llvmpipe device-ID: 10005:0000
  API: EGL Message: EGL data requires eglinfo. Check --recommends.
  Info: Tools: api: glxinfo,vulkaninfo x11: xdriinfo, xdpyinfo, xprop,
    xrandr

Checking the build @ankursinha shared (FEDORA-2025-1a91411755 — bugfix update for mesa — Fedora Updates System) it seems we need to wait for mesa-25.0.7-3.fc41 (note the -3) for Fedora 41.

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yes the fixed version for f41 is mesa 25.0.7-3
Just run the dnf command to update from the updates-testing repository. Test it and give positive karma, so it get’s pushed to stable for everyone still using f41.

you have not enabled update-archive repository, where all previous versions are available.
You’ve downgraded to the mesa version included in the initial F41 release.

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