I’m sorry for my complain. This can be easy for you guys but it is so hard for me as a beginner to linux. I tried my best but I can’t install it. Please, Help me find a way .
What piece of software are you talking about? Serial Cloner?
For biotech
that a Yes or a No to my previous question?
I mean serial cloner app for biotech.
Any or a specific one, for example the one I linked?
I’m sorry for confusing bro. Yes, it is.
Questions are:
- what are the required dependencies?
- Are the dependencies packaged for Fedora?
Note that the program is quite old and hasn’t been updated since 2013. It is likely compiled for 32-bit architecture/libraries … (see Serial Cloner - forum.archlinux.de)
If I was you, I would run in a MS Windows virtual machine.
You know Ugene is available in Fedora repos …
[jakfrost ~]$ dnf search ugene
Last metadata expiration check: 3 days, 0:10:38 ago on Sat 01 Jun 2024 08:24:31 AM.
=================================================== Name Exactly Matched: ugene ====================================================
ugene.x86_64 : Integrated bioinformatics toolkit
[jakfrost ~]$ dnf info ugene
Last metadata expiration check: 0:02:21 ago on Tue 04 Jun 2024 08:41:32 AM.
Available Packages
Name : ugene
Version : 50.0
Release : 1.fc40
Architecture : x86_64
Size : 30 M
Source : ugene-50.0-1.fc40.src.rpm
Repository : updates
Summary : Integrated bioinformatics toolkit
URL : http://ugene.net
License : GPLv2+ and GPLv2
Description : Unipro UGENE is a cross-platform visual environment for DNA and protein
: sequence analysis. UGENE integrates the most important bioinformatics
: computational algorithms and provides an easy-to-use GUI for performing
: complex analysis of the genomic data. One of the main features of UGENE
: is a designer for custom bioinformatics workflows.
And not sure but this too …
[jakfrost ~]$ dnf info R-ape.x86_64
…
Available Packages
Name : R-ape
Version : 5.7.1
Release : 6.fc40
Architecture : x86_64
Size : 3.1 M
Source : R-ape-5.7.1-6.fc40.src.rpm
Repository : updates
Summary : Analyses of Phylogenetics and Evolution
URL : https://CRAN.R-project.org/package=ape
License : GPL-2.0-only OR GPL-3.0-only
Description : Functions for reading, writing, plotting, and manipulating phylogenetic
: trees, analyses of comparative data in a phylogenetic framework, ancestral
: character analyses, analyses of diversification and macroevolution,
: computing distances from DNA sequences, reading and writing nucleotide
: sequences as well as importing from BioConductor, and several tools such as
: Mantel’s test, generalized skyline plots, graphical exploration of
: phylogenetic data (alex, trex, kronoviz), estimation of absolute
: evolutionary rates and clock-like trees using mean path lengths and
: penalized likelihood, dating trees with non-contemporaneous sequences,
: translating DNA into AA sequences, and assessing sequence alignments.
: Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and
: triangle methods, and several methods handling incomplete distance matrices
: (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call
: external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are
: returned into R.
Thank you for ur infos, bro.